Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.64□□□□□ -0.23
Fv4P11370 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.64□□□□□ -0.23
Fv4P11370 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.64□□□□□ -0.23
Fv4P11370 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Fv4P11370 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.64□□□□□ -0.23
Fv4P11370 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Fv4P11370 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 BC001981-202ENSMUST00000191393 1545 ntBASIC13.64□□□□□ -0.23
Fv4P11370 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Fv4P11370 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fv4P11370 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Fv4P11370 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.63□□□□□ -0.23
Fv4P11370 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.63□□□□□ -0.23
Fv4P11370 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Gm6222-201ENSMUST00000120787 396 ntBASIC13.63□□□□□ -0.23
Fv4P11370 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.63□□□□□ -0.23
Fv4P11370 AA619741-201ENSMUST00000195095 646 ntBASIC13.63□□□□□ -0.23
Fv4P11370 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Fv4P11370 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Fv4P11370 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.63□□□□□ -0.23
Fv4P11370 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Fv4P11370 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fv4P11370 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.63□□□□□ -0.23
Fv4P11370 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.63□□□□□ -0.23
Fv4P11370 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Fv4P11370 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fv4P11370 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.62□□□□□ -0.23
Fv4P11370 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.62□□□□□ -0.23
Fv4P11370 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.62□□□□□ -0.23
Fv4P11370 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fv4P11370 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.62□□□□□ -0.23
Fv4P11370 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Gm13823-201ENSMUST00000119930 345 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.62□□□□□ -0.23
Fv4P11370 Gm27494-201ENSMUST00000184735 189 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Gm5264-201ENSMUST00000190584 848 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.62□□□□□ -0.23
Fv4P11370 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fv4P11370 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Fv4P11370 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fv4P11370 Matn2-206ENSMUST00000228570 2798 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.62□□□□□ -0.23
Fv4P11370 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.62□□□□□ -0.23
Fv4P11370 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Fv4P11370 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.62□□□□□ -0.23
Fv4P11370 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Fv4P11370 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Fv4P11370 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms