Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Apaf1O88879 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.31■□□□□ 0.52
Apaf1O88879 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.31■□□□□ 0.52
Apaf1O88879 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.31■□□□□ 0.52
Apaf1O88879 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Apaf1O88879 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Apaf1O88879 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.31■□□□□ 0.52
Apaf1O88879 Mir497b-201ENSMUST00000093601 125 ntBASIC18.31■□□□□ 0.52
Apaf1O88879 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Apaf1O88879 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Apaf1O88879 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.3■□□□□ 0.52
Apaf1O88879 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Apaf1O88879 Gm12020-201ENSMUST00000119030 2042 ntBASIC18.3■□□□□ 0.52
Apaf1O88879 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.3■□□□□ 0.52
Apaf1O88879 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.3■□□□□ 0.52
Apaf1O88879 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18.3■□□□□ 0.52
Apaf1O88879 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Apaf1O88879 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.3■□□□□ 0.52
Apaf1O88879 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.3■□□□□ 0.52
Apaf1O88879 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Apaf1O88879 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC18.3■□□□□ 0.52
Apaf1O88879 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.3■□□□□ 0.52
Apaf1O88879 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Apaf1O88879 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Apaf1O88879 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Apaf1O88879 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.29■□□□□ 0.52
Apaf1O88879 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.29■□□□□ 0.52
Apaf1O88879 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.29■□□□□ 0.52
Apaf1O88879 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Apaf1O88879 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.29■□□□□ 0.52
Apaf1O88879 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.29■□□□□ 0.52
Apaf1O88879 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Apaf1O88879 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Apaf1O88879 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.29■□□□□ 0.52
Apaf1O88879 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Apaf1O88879 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.28■□□□□ 0.52
Apaf1O88879 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Gm12859-201ENSMUST00000117834 427 ntBASIC18.28■□□□□ 0.52
Apaf1O88879 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Apaf1O88879 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Apaf1O88879 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Apaf1O88879 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Apaf1O88879 Gm28760-201ENSMUST00000185995 736 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms