Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
MSH5O43196 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 DDX43P2-201ENST00000604753 1354 ntBASIC23.54■■□□□ 1.36
MSH5O43196 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
MSH5O43196 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
MSH5O43196 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.54■■□□□ 1.36
MSH5O43196 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 RNU6-1176P-201ENST00000390955 107 ntBASIC23.54■■□□□ 1.36
MSH5O43196 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC23.54■■□□□ 1.36
MSH5O43196 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.54■■□□□ 1.36
MSH5O43196 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC23.54■■□□□ 1.36
MSH5O43196 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.54■■□□□ 1.36
MSH5O43196 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC23.54■■□□□ 1.36
MSH5O43196 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC23.54■■□□□ 1.36
MSH5O43196 AC112206.4-201ENST00000515142 405 ntBASIC23.54■■□□□ 1.36
MSH5O43196 RNU5A-4P-201ENST00000516588 111 ntBASIC23.54■■□□□ 1.36
MSH5O43196 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC23.54■■□□□ 1.36
MSH5O43196 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC23.54■■□□□ 1.36
MSH5O43196 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC23.54■■□□□ 1.36
MSH5O43196 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
MSH5O43196 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC23.54■■□□□ 1.36
MSH5O43196 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
MSH5O43196 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
MSH5O43196 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC23.53■■□□□ 1.36
MSH5O43196 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
MSH5O43196 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
MSH5O43196 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.53■■□□□ 1.36
MSH5O43196 AC104109.2-201ENST00000602919 1418 ntBASIC23.53■■□□□ 1.36
MSH5O43196 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC23.53■■□□□ 1.36
MSH5O43196 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC23.53■■□□□ 1.36
MSH5O43196 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 TCEAL1-202ENST00000372625 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 UPF3AP3-201ENST00000420996 769 ntBASIC23.53■■□□□ 1.36
MSH5O43196 TRIM60P13-201ENST00000432350 1283 ntBASIC23.53■■□□□ 1.36
MSH5O43196 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.53■■□□□ 1.36
MSH5O43196 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.53■■□□□ 1.36
MSH5O43196 AC112187.3-201ENST00000607844 408 ntBASIC23.53■■□□□ 1.36
MSH5O43196 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
MSH5O43196 AL356596.1-201ENST00000624230 379 ntBASIC23.53■■□□□ 1.36
MSH5O43196 AL390862.1-201ENST00000635467 1469 ntBASIC23.53■■□□□ 1.36
MSH5O43196 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.53■■□□□ 1.36
MSH5O43196 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
MSH5O43196 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
MSH5O43196 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MSH5O43196 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
MSH5O43196 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
MSH5O43196 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
MSH5O43196 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC23.52■■□□□ 1.36
MSH5O43196 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.52■■□□□ 1.36
MSH5O43196 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC23.52■■□□□ 1.36
MSH5O43196 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.52■■□□□ 1.36
MSH5O43196 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.52■■□□□ 1.36
MSH5O43196 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.52■■□□□ 1.36
MSH5O43196 HNRNPDP1-201ENST00000439535 754 ntBASIC23.52■■□□□ 1.36
MSH5O43196 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
MSH5O43196 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.52■■□□□ 1.36
MSH5O43196 AC140113.2-201ENST00000604370 208 ntBASIC23.52■■□□□ 1.36
MSH5O43196 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.52■■□□□ 1.36
MSH5O43196 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
MSH5O43196 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.52■■□□□ 1.36
MSH5O43196 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
MSH5O43196 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.51■■□□□ 1.35
MSH5O43196 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
MSH5O43196 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
MSH5O43196 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.51■■□□□ 1.35
MSH5O43196 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MSH5O43196 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MSH5O43196 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MSH5O43196 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
MSH5O43196 ANO7L1-203ENST00000602586 1720 ntBASIC23.51■■□□□ 1.35
MSH5O43196 RPS2P28-201ENST00000314255 741 ntBASIC23.51■■□□□ 1.35
MSH5O43196 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
MSH5O43196 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC23.51■■□□□ 1.35
MSH5O43196 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MSH5O43196 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.51■■□□□ 1.35
MSH5O43196 AC011290.1-201ENST00000439751 414 ntTSL 5 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms