Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm42612-201ENSMUST00000197986 623 ntBASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm43170-201ENSMUST00000199827 612 ntBASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm9794-201ENSMUST00000202370 423 ntBASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm6916-202ENSMUST00000205523 195 ntBASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm7653-201ENSMUST00000214567 508 ntBASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh17E9PXF0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh17E9PXF0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh17E9PXF0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Pcdh17E9PXF0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Gm14042-201ENSMUST00000120139 833 ntBASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Gm14928-201ENSMUST00000120198 477 ntBASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh17E9PXF0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Gm12490-201ENSMUST00000120255 560 ntBASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Gm21854-201ENSMUST00000179901 471 ntBASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh17E9PXF0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms