Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.79□□□□□ -0.36
Gm3543D3Z235 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Gm13453-201ENSMUST00000118708 357 ntBASIC12.79□□□□□ -0.36
Gm3543D3Z235 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm3543D3Z235 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.78□□□□□ -0.36
Gm3543D3Z235 Olfr286-202ENSMUST00000205305 969 ntBASIC12.78□□□□□ -0.36
Gm3543D3Z235 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm3543D3Z235 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm3543D3Z235 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm3543D3Z235 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Gm3543D3Z235 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Gm5566-201ENSMUST00000116118 459 ntBASIC12.77□□□□□ -0.37
Gm3543D3Z235 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Gm13823-201ENSMUST00000119930 345 ntBASIC12.77□□□□□ -0.37
Gm3543D3Z235 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Gm9719-201ENSMUST00000162765 543 ntBASIC12.77□□□□□ -0.37
Gm3543D3Z235 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Gm28630-201ENSMUST00000187806 498 ntBASIC12.77□□□□□ -0.37
Gm3543D3Z235 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm3543D3Z235 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms