Protein–RNA interactions for Protein: A8DUK4

Hbb-bs, Beta-globin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-bsA8DUK4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gm37722-201ENSMUST00000193757 208 ntBASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gm7977-201ENSMUST00000193787 748 ntBASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 AC164567.1-201ENSMUST00000219185 960 ntBASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 AC135637.1-201ENSMUST00000227750 365 ntBASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hbb-bsA8DUK4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Gm37856-201ENSMUST00000191634 999 ntBASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 AC112142.1-201ENSMUST00000228796 918 ntBASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hbb-bsA8DUK4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms