Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pfdn1Q9CWM4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm8825-201ENSMUST00000182565 998 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm4518-201ENSMUST00000182638 718 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm10602-201ENSMUST00000098239 609 ntBASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pfdn1Q9CWM4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Gm25927-201ENSMUST00000175058 117 ntBASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Gm9987-201ENSMUST00000069768 567 ntBASIC12.36□□□□□ -0.43
Pfdn1Q9CWM4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms