Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Mir3113-201ENSMUST00000175478 76 ntBASIC16.62■□□□□ 0.25
Smc3Q9CW03 Gm27741-201ENSMUST00000185060 237 ntBASIC16.62■□□□□ 0.25
Smc3Q9CW03 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.62■□□□□ 0.25
Smc3Q9CW03 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.62■□□□□ 0.25
Smc3Q9CW03 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smc3Q9CW03 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Gm17271-201ENSMUST00000165535 355 ntBASIC16.61■□□□□ 0.25
Smc3Q9CW03 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Smc3Q9CW03 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.6■□□□□ 0.25
Smc3Q9CW03 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Gm12882-201ENSMUST00000121696 517 ntBASIC16.6■□□□□ 0.25
Smc3Q9CW03 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.6■□□□□ 0.25
Smc3Q9CW03 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smc3Q9CW03 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.6■□□□□ 0.25
Smc3Q9CW03 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.59■□□□□ 0.25
Smc3Q9CW03 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.59■□□□□ 0.25
Smc3Q9CW03 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Gm11025-201ENSMUST00000140773 466 ntBASIC16.59■□□□□ 0.25
Smc3Q9CW03 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smc3Q9CW03 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms