Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rnf111Q99ML9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.71□□□□□ -0.21
Rnf111Q99ML9 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rnf111Q99ML9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf111Q99ML9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf111Q99ML9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf111Q99ML9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf111Q99ML9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
Rnf111Q99ML9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf111Q99ML9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rnf111Q99ML9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Gm6973-201ENSMUST00000117080 721 ntBASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf111Q99ML9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms