Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Gm8652-201ENSMUST00000181363 964 ntBASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Gm45784-201ENSMUST00000188360 142 ntBASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcd2Q99JR8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm15371-201ENSMUST00000117057 784 ntBASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm12485-201ENSMUST00000119641 291 ntBASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm27847-201ENSMUST00000183711 107 ntBASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm27375-201ENSMUST00000183799 107 ntBASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm7561-201ENSMUST00000211203 886 ntBASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd2Q99JR8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd2Q99JR8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm13689-201ENSMUST00000119360 685 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Mir6420-201ENSMUST00000185032 102 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm6983-201ENSMUST00000214912 628 ntBASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcd2Q99JR8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms