Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.32■□□□□ 0.2
Smc1bQ920F6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smc1bQ920F6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Gm9522-201ENSMUST00000182394 926 ntBASIC16.31■□□□□ 0.2
Smc1bQ920F6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.31■□□□□ 0.2
Smc1bQ920F6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smc1bQ920F6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.3■□□□□ 0.2
Smc1bQ920F6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Gm16476-201ENSMUST00000221544 139 ntBASIC16.3■□□□□ 0.2
Smc1bQ920F6 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.3■□□□□ 0.2
Smc1bQ920F6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smc1bQ920F6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc1bQ920F6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms