Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm27533-201ENSMUST00000183800 152 ntBASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Shd-206ENSMUST00000225145 998 ntBASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdhb6Q91XZ4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Gm14701-201ENSMUST00000117156 348 ntBASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Gm25948-201ENSMUST00000175334 112 ntBASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Gm6916-202ENSMUST00000205523 195 ntBASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdhb6Q91XZ4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Gm15653-201ENSMUST00000119247 907 ntBASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Gm25144-201ENSMUST00000179561 110 ntBASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Gm25352-201ENSMUST00000179815 110 ntBASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb6Q91XZ4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdhb6Q91XZ4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms