Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Mir1895-201ENSMUST00000122615 79 ntBASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm25911-201ENSMUST00000157621 56 ntBASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H1fooQ8VIK3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.84□□□□□ -0.51
H1fooQ8VIK3 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H1fooQ8VIK3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
H1fooQ8VIK3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.51
H1fooQ8VIK3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
H1fooQ8VIK3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H1fooQ8VIK3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms