Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpa1Q8VEE4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpa1Q8VEE4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpa1Q8VEE4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Gm37648-201ENSMUST00000192072 2563 ntBASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Gm43347-201ENSMUST00000200226 580 ntBASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpa1Q8VEE4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa1Q8VEE4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms