Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Gm17968-201ENSMUST00000194902 784 ntBASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Gm18206-201ENSMUST00000207027 926 ntBASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.04■□□□□ 0.48
Ccdc27Q3V036 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccdc27Q3V036 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gm9727-201ENSMUST00000161387 555 ntBASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gm2451-201ENSMUST00000199447 999 ntBASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gm10290-201ENSMUST00000200451 999 ntBASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gm45747-201ENSMUST00000212203 999 ntBASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gm5364-201ENSMUST00000216789 889 ntBASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccdc27Q3V036 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Gm9385-201ENSMUST00000117563 472 ntBASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Olfr286-202ENSMUST00000205305 969 ntBASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccdc27Q3V036 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.02■□□□□ 0.47
Ccdc27Q3V036 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc27Q3V036 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC18.02■□□□□ 0.47
Ccdc27Q3V036 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc27Q3V036 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc27Q3V036 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccdc27Q3V036 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.02■□□□□ 0.47
Ccdc27Q3V036 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Gm43514-201ENSMUST00000198852 424 ntBASIC18.01■□□□□ 0.47
Ccdc27Q3V036 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms