Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Gm8213-201ENSMUST00000118191 441 ntBASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Gm12997-201ENSMUST00000120207 640 ntBASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Gm6152-201ENSMUST00000151704 340 ntBASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Gm22902-201ENSMUST00000158488 302 ntBASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fam196aQ3USH1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Gm4271-201ENSMUST00000174444 973 ntBASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Fam196aQ3USH1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm12203-201ENSMUST00000118235 598 ntBASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm12209-201ENSMUST00000120089 596 ntBASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm10156-201ENSMUST00000122364 462 ntBASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm8927-201ENSMUST00000181978 981 ntBASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Gm3222-201ENSMUST00000071282 990 ntBASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Fam196aQ3USH1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms