Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.86□□□□□ -0.19
Lhx1P63006 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lhx1P63006 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Lhx1P63006 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lhx1P63006 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.86□□□□□ -0.19
Lhx1P63006 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Lhx1P63006 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.86□□□□□ -0.19
Lhx1P63006 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lhx1P63006 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Lhx1P63006 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.85□□□□□ -0.19
Lhx1P63006 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.85□□□□□ -0.19
Lhx1P63006 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.85□□□□□ -0.19
Lhx1P63006 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.85□□□□□ -0.19
Lhx1P63006 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.85□□□□□ -0.19
Lhx1P63006 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Gm28760-201ENSMUST00000185995 736 ntBASIC13.85□□□□□ -0.19
Lhx1P63006 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.85□□□□□ -0.19
Lhx1P63006 Gm6218-201ENSMUST00000219812 628 ntBASIC13.85□□□□□ -0.19
Lhx1P63006 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.85□□□□□ -0.19
Lhx1P63006 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lhx1P63006 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.85□□□□□ -0.19
Lhx1P63006 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Lhx1P63006 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lhx1P63006 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lhx1P63006 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lhx1P63006 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Lhx1P63006 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.84□□□□□ -0.19
Lhx1P63006 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lhx1P63006 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.84□□□□□ -0.19
Lhx1P63006 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms