Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd1P40201 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd1P40201 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd1P40201 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.92
Chd1P40201 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.83■□□□□ 0.92
Chd1P40201 Gm13034-201ENSMUST00000121342 3177 ntBASIC20.83■□□□□ 0.92
Chd1P40201 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chd1P40201 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.82■□□□□ 0.92
Chd1P40201 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Chd1P40201 Gm27438-201ENSMUST00000183480 110 ntBASIC20.82■□□□□ 0.92
Chd1P40201 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC20.82■□□□□ 0.92
Chd1P40201 D9Wsu149-201ENSMUST00000214169 594 ntBASIC20.82■□□□□ 0.92
Chd1P40201 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chd1P40201 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chd1P40201 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chd1P40201 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Gm44551-201ENSMUST00000208804 171 ntBASIC20.81■□□□□ 0.92
Chd1P40201 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC20.81■□□□□ 0.92
Chd1P40201 Gm11531-201ENSMUST00000117614 555 ntBASIC20.81■□□□□ 0.92
Chd1P40201 Gm25043-201ENSMUST00000158604 212 ntBASIC20.81■□□□□ 0.92
Chd1P40201 Gm20426-201ENSMUST00000173657 440 ntBASIC20.81■□□□□ 0.92
Chd1P40201 AC173210.1-201ENSMUST00000222341 1131 ntBASIC20.81■□□□□ 0.92
Chd1P40201 AC069562.3-201ENSMUST00000225387 587 ntBASIC20.81■□□□□ 0.92
Chd1P40201 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chd1P40201 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Chd1P40201 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Chd1P40201 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC20.8■□□□□ 0.92
Chd1P40201 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chd1P40201 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Chd1P40201 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC20.79■□□□□ 0.92
Chd1P40201 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chd1P40201 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chd1P40201 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.79■□□□□ 0.92
Chd1P40201 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Chd1P40201 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Chd1P40201 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chd1P40201 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Chd1P40201 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Gm8337-201ENSMUST00000187358 1938 ntBASIC20.79■□□□□ 0.92
Chd1P40201 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chd1P40201 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Chd1P40201 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC20.78■□□□□ 0.92
Chd1P40201 Gm26956-201ENSMUST00000182176 986 ntBASIC20.78■□□□□ 0.92
Chd1P40201 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Ighv5-7-201ENSMUST00000192302 244 ntBASIC20.78■□□□□ 0.92
Chd1P40201 Gm9555-201ENSMUST00000200908 583 ntBASIC20.78■□□□□ 0.92
Chd1P40201 Gm45219-201ENSMUST00000205602 465 ntBASIC20.78■□□□□ 0.92
Chd1P40201 AC122305.4-201ENSMUST00000216159 1206 ntBASIC20.78■□□□□ 0.92
Chd1P40201 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC20.78■□□□□ 0.92
Chd1P40201 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd1P40201 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms