Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Gm43094-201ENSMUST00000196549 921 ntBASIC15.14■□□□□ 0.01
Chrna1P04756 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Chrna1P04756 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chrna1P04756 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Chrna1P04756 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chrna1P04756 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna1P04756 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna1P04756 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.13■□□□□ 0.01
Chrna1P04756 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.13■□□□□ 0.01
Chrna1P04756 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.13■□□□□ 0.01
Chrna1P04756 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chrna1P04756 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Chrna1P04756 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chrna1P04756 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.13■□□□□ 0.01
Chrna1P04756 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna1P04756 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chrna1P04756 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chrna1P04756 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chrna1P04756 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chrna1P04756 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Chrna1P04756 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
Chrna1P04756 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Gm11478-201ENSMUST00000117851 599 ntBASIC15.12■□□□□ 0.01
Chrna1P04756 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.12■□□□□ 0.01
Chrna1P04756 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chrna1P04756 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Chrna1P04756 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna1P04756 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.11■□□□□ 0.01
Chrna1P04756 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.11■□□□□ 0.01
Chrna1P04756 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chrna1P04756 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
Chrna1P04756 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna1P04756 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Chrna1P04756 Gm27701-201ENSMUST00000184498 110 ntBASIC15.11■□□□□ 0.01
Chrna1P04756 Gm28911-201ENSMUST00000188837 117 ntBASIC15.11■□□□□ 0.01
Chrna1P04756 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
Chrna1P04756 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.11■□□□□ 0.01
Chrna1P04756 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms