Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Gm43630-201ENSMUST00000201550 776 ntBASIC12.42□□□□□ -0.42
NgfP01139 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.42□□□□□ -0.42
NgfP01139 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NgfP01139 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NgfP01139 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NgfP01139 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NgfP01139 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.41□□□□□ -0.42
NgfP01139 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.41□□□□□ -0.42
NgfP01139 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NgfP01139 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Gm13689-201ENSMUST00000119360 685 ntBASIC12.41□□□□□ -0.42
NgfP01139 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.41□□□□□ -0.42
NgfP01139 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.41□□□□□ -0.42
NgfP01139 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.41□□□□□ -0.42
NgfP01139 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.41□□□□□ -0.42
NgfP01139 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.41□□□□□ -0.42
NgfP01139 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.41□□□□□ -0.42
NgfP01139 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.41□□□□□ -0.42
NgfP01139 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NgfP01139 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
NgfP01139 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.4□□□□□ -0.42
NgfP01139 Gm38223-201ENSMUST00000194484 695 ntBASIC12.4□□□□□ -0.42
NgfP01139 Gm44397-201ENSMUST00000195950 113 ntBASIC12.4□□□□□ -0.42
NgfP01139 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
NgfP01139 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.4□□□□□ -0.42
NgfP01139 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.4□□□□□ -0.42
NgfP01139 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
NgfP01139 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
NgfP01139 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.4□□□□□ -0.42
NgfP01139 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.4□□□□□ -0.42
NgfP01139 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.4□□□□□ -0.42
NgfP01139 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NgfP01139 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
NgfP01139 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
NgfP01139 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.39□□□□□ -0.43
NgfP01139 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NgfP01139 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NgfP01139 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms