Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC27.18■■□□□ 1.94
CHD1O14646 SLC9A3P2-201ENST00000447821 2021 ntBASIC27.18■■□□□ 1.94
CHD1O14646 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC27.18■■□□□ 1.94
CHD1O14646 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHD1O14646 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHD1O14646 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC27.18■■□□□ 1.94
CHD1O14646 IGHJ2P-201ENST00000454480 60 ntBASIC27.18■■□□□ 1.94
CHD1O14646 MIR5189-201ENST00000577370 114 ntBASIC27.18■■□□□ 1.94
CHD1O14646 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC27.18■■□□□ 1.94
CHD1O14646 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CHD1O14646 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC27.18■■□□□ 1.94
CHD1O14646 AC135776.1-201ENST00000319817 2481 ntBASIC27.18■■□□□ 1.94
CHD1O14646 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
CHD1O14646 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHD1O14646 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHD1O14646 IMPDH1P4-201ENST00000445028 1534 ntBASIC27.17■■□□□ 1.94
CHD1O14646 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHD1O14646 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC27.17■■□□□ 1.94
CHD1O14646 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CHD1O14646 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC27.17■■□□□ 1.94
CHD1O14646 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC27.17■■□□□ 1.94
CHD1O14646 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
CHD1O14646 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC27.17■■□□□ 1.94
CHD1O14646 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHD1O14646 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
CHD1O14646 LINC00304-203ENST00000565008 1864 ntBASIC27.17■■□□□ 1.94
CHD1O14646 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 LYSMD4-203ENST00000378904 2122 ntBASIC27.16■■□□□ 1.94
CHD1O14646 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
CHD1O14646 USB1-202ENST00000423271 1217 ntTSL 2 BASIC27.16■■□□□ 1.94
CHD1O14646 KRT43P-201ENST00000434019 910 ntBASIC27.16■■□□□ 1.94
CHD1O14646 SERBP1P3-201ENST00000459980 809 ntBASIC27.16■■□□□ 1.94
CHD1O14646 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC27.16■■□□□ 1.94
CHD1O14646 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC27.16■■□□□ 1.94
CHD1O14646 PAM16-204ENST00000571941 674 ntTSL 3 BASIC27.16■■□□□ 1.94
CHD1O14646 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC27.16■■□□□ 1.94
CHD1O14646 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC27.16■■□□□ 1.94
CHD1O14646 MIR3615-201ENST00000581999 87 ntBASIC27.16■■□□□ 1.94
CHD1O14646 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC27.16■■□□□ 1.94
CHD1O14646 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
CHD1O14646 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CHD1O14646 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
CHD1O14646 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CHD1O14646 SLC25A1P3-201ENST00000395415 828 ntBASIC27.16■■□□□ 1.94
CHD1O14646 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC27.16■■□□□ 1.94
CHD1O14646 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC27.16■■□□□ 1.94
CHD1O14646 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC27.16■■□□□ 1.94
CHD1O14646 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC27.16■■□□□ 1.94
CHD1O14646 AL021578.1-201ENST00000613646 709 ntBASIC27.16■■□□□ 1.94
CHD1O14646 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
CHD1O14646 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CHD1O14646 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
CHD1O14646 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
CHD1O14646 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC27.15■■□□□ 1.94
CHD1O14646 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
CHD1O14646 FAM21FP-201ENST00000426241 1131 ntBASIC27.15■■□□□ 1.94
CHD1O14646 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC27.15■■□□□ 1.94
CHD1O14646 MAX-210ENST00000555419 765 ntTSL 5 BASIC27.15■■□□□ 1.94
CHD1O14646 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC27.15■■□□□ 1.94
CHD1O14646 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC27.15■■□□□ 1.94
CHD1O14646 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 AC006538.1-201ENST00000567905 1585 ntBASIC27.15■■□□□ 1.94
CHD1O14646 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
CHD1O14646 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
CHD1O14646 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC27.15■■□□□ 1.94
CHD1O14646 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CHD1O14646 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CHD1O14646 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
CHD1O14646 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC27.14■■□□□ 1.94
CHD1O14646 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC27.14■■□□□ 1.94
CHD1O14646 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC27.14■■□□□ 1.94
CHD1O14646 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC27.14■■□□□ 1.94
CHD1O14646 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC27.14■■□□□ 1.94
CHD1O14646 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CHD1O14646 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CHD1O14646 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC27.14■■□□□ 1.94
CHD1O14646 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CHD1O14646 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC27.14■■□□□ 1.94
CHD1O14646 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CHD1O14646 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CHD1O14646 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CHD1O14646 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC27.14■■□□□ 1.93
CHD1O14646 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC27.14■■□□□ 1.93
CHD1O14646 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC27.14■■□□□ 1.93
CHD1O14646 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms