Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm5587-201ENSMUST00000206270 674 ntBASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Gm9172-201ENSMUST00000212092 954 ntBASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Trav8-1A0A075B641 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gm13312-201ENSMUST00000119631 718 ntBASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gm11950-201ENSMUST00000121615 838 ntBASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gm8318-201ENSMUST00000182954 872 ntBASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gm43767-201ENSMUST00000198933 381 ntBASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav8-1A0A075B641 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav8-1A0A075B641 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms