Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Chd1lQ9CXF7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Gm37133-201ENSMUST00000192705 1922 ntBASIC16■□□□□ 0.15
Chd1lQ9CXF7 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16■□□□□ 0.15
Chd1lQ9CXF7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16■□□□□ 0.15
Chd1lQ9CXF7 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Gm9924-202ENSMUST00000192760 2311 ntBASIC16■□□□□ 0.15
Chd1lQ9CXF7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
Chd1lQ9CXF7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Gm9182-201ENSMUST00000217829 639 ntBASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Chd1lQ9CXF7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Chd1lQ9CXF7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd1lQ9CXF7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd1lQ9CXF7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Chd1lQ9CXF7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd1lQ9CXF7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Chd1lQ9CXF7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Chd1lQ9CXF7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms