Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Gm17376-201ENSMUST00000166016 84 ntBASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Mir5120-201ENSMUST00000175020 78 ntBASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.63□□□□□ -0.07
Col25a1Q99MQ5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm6407-201ENSMUST00000176468 549 ntBASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm24196-201ENSMUST00000179161 110 ntBASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm6082-201ENSMUST00000215204 454 ntBASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.62□□□□□ -0.07
Col25a1Q99MQ5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Gm15429-201ENSMUST00000151268 798 ntBASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Gm38158-201ENSMUST00000194617 339 ntBASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Gm37008-201ENSMUST00000195712 319 ntBASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col25a1Q99MQ5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col25a1Q99MQ5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms