Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Gm14660-201ENSMUST00000119809 575 ntBASIC13.99□□□□□ -0.17
Vsx1Q91V10 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.99□□□□□ -0.17
Vsx1Q91V10 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Gm18307-201ENSMUST00000206864 949 ntBASIC13.99□□□□□ -0.17
Vsx1Q91V10 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.99□□□□□ -0.17
Vsx1Q91V10 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vsx1Q91V10 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.98□□□□□ -0.17
Vsx1Q91V10 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.98□□□□□ -0.17
Vsx1Q91V10 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx1Q91V10 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 BC001981-202ENSMUST00000191393 1545 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm18827-201ENSMUST00000188341 790 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm43179-201ENSMUST00000198797 275 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm5279-201ENSMUST00000199575 745 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Gm17794-201ENSMUST00000220252 955 ntBASIC13.97□□□□□ -0.17
Vsx1Q91V10 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx1Q91V10 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx1Q91V10 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms