Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.04■□□□□ -0
TraipQ8VIG6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.04■□□□□ -0
TraipQ8VIG6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Gm27772-201ENSMUST00000184900 187 ntBASIC15.04■□□□□ -0
TraipQ8VIG6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Gm45384-201ENSMUST00000210451 277 ntBASIC15.04■□□□□ -0
TraipQ8VIG6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TraipQ8VIG6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.04■□□□□ -0
TraipQ8VIG6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.04■□□□□ -0
TraipQ8VIG6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.04■□□□□ -0
TraipQ8VIG6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.04■□□□□ -0
TraipQ8VIG6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.03■□□□□ -0
TraipQ8VIG6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.03■□□□□ -0
TraipQ8VIG6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.03■□□□□ -0
TraipQ8VIG6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TraipQ8VIG6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.03■□□□□ -0
TraipQ8VIG6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
TraipQ8VIG6 Gm11478-201ENSMUST00000117851 599 ntBASIC15.03■□□□□ -0
TraipQ8VIG6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.03■□□□□ -0
TraipQ8VIG6 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC15.03■□□□□ -0
TraipQ8VIG6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.03■□□□□ -0
TraipQ8VIG6 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.03■□□□□ -0
TraipQ8VIG6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TraipQ8VIG6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TraipQ8VIG6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.03■□□□□ -0
TraipQ8VIG6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TraipQ8VIG6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.02■□□□□ -0
TraipQ8VIG6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TraipQ8VIG6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.02■□□□□ -0
TraipQ8VIG6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TraipQ8VIG6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 Gm9002-201ENSMUST00000178437 499 ntBASIC15.02■□□□□ -0
TraipQ8VIG6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.02■□□□□ -0
TraipQ8VIG6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.02■□□□□ -0
TraipQ8VIG6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TraipQ8VIG6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.02□□□□□ -0.01
TraipQ8VIG6 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.02□□□□□ -0.01
TraipQ8VIG6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TraipQ8VIG6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Sybu-209ENSMUST00000228639 4113 ntBASIC15.01□□□□□ -0.01
TraipQ8VIG6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TraipQ8VIG6 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.01□□□□□ -0.01
TraipQ8VIG6 Gm15806-201ENSMUST00000120696 955 ntBASIC15.01□□□□□ -0.01
TraipQ8VIG6 Gm11918-201ENSMUST00000121660 179 ntBASIC15.01□□□□□ -0.01
TraipQ8VIG6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms