Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Lsm1Q8VC85 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
Lsm1Q8VC85 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Lsm1Q8VC85 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lsm1Q8VC85 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Lsm1Q8VC85 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Gm10175-201ENSMUST00000086013 645 ntBASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm1Q8VC85 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Gm18057-201ENSMUST00000208220 503 ntBASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lsm1Q8VC85 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Gm11779-201ENSMUST00000118541 368 ntBASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.56□□□□□ -0.24
Lsm1Q8VC85 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms