Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Gm8584-201ENSMUST00000171982 758 ntBASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Gm44855-201ENSMUST00000205725 362 ntBASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.15■□□□□ 0.02
Rpp40Q8R1F9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpp40Q8R1F9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpp40Q8R1F9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.12■□□□□ 0.01
Rpp40Q8R1F9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms