Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sf3a1Q8K4Z5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Sf3a1Q8K4Z5 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Sf3a1Q8K4Z5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gm14767-201ENSMUST00000121559 586 ntBASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gm27680-201ENSMUST00000184192 160 ntBASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gm44344-201ENSMUST00000200287 129 ntBASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sf3a1Q8K4Z5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Gm44608-201ENSMUST00000206827 855 ntBASIC17.31■□□□□ 0.36
Sf3a1Q8K4Z5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms