Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Gm9727-201ENSMUST00000161387 555 ntBASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 AA619741-201ENSMUST00000195095 646 ntBASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.46■□□□□ 0.07
Sox30Q8CGW4 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Sox30Q8CGW4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.46■□□□□ 0.06
Sox30Q8CGW4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sox30Q8CGW4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sox30Q8CGW4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Sox30Q8CGW4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Sox30Q8CGW4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Sox30Q8CGW4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Gm45612-201ENSMUST00000211320 160 ntBASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Gm10819-201ENSMUST00000099988 561 ntBASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.45■□□□□ 0.06
Sox30Q8CGW4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Mir8117-201ENSMUST00000184773 107 ntBASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Sox30Q8CGW4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.43■□□□□ 0.06
Sox30Q8CGW4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.43■□□□□ 0.06
Sox30Q8CGW4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms