Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Gm9726-201ENSMUST00000180321 678 ntBASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Gm10252-201ENSMUST00000209541 832 ntBASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smco3Q8BQM7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Gm18041-201ENSMUST00000218210 618 ntBASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smco3Q8BQM7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smco3Q8BQM7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smco3Q8BQM7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smco3Q8BQM7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smco3Q8BQM7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms