Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Gm11918-201ENSMUST00000121660 179 ntBASIC13.53□□□□□ -0.24
Vrk1Q80X41 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.53□□□□□ -0.24
Vrk1Q80X41 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.53□□□□□ -0.24
Vrk1Q80X41 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vrk1Q80X41 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vrk1Q80X41 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.52□□□□□ -0.25
Vrk1Q80X41 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.52□□□□□ -0.25
Vrk1Q80X41 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Gm25857-201ENSMUST00000082788 129 ntBASIC13.52□□□□□ -0.25
Vrk1Q80X41 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vrk1Q80X41 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.51□□□□□ -0.25
Vrk1Q80X41 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.51□□□□□ -0.25
Vrk1Q80X41 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.51□□□□□ -0.25
Vrk1Q80X41 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vrk1Q80X41 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms