Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.99■□□□□ 0.31
Mre11Q61216 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Gm33142-201ENSMUST00000193913 867 ntBASIC16.99■□□□□ 0.31
Mre11Q61216 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Mre11Q61216 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Mre11Q61216 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Mre11Q61216 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Mre11Q61216 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.98■□□□□ 0.31
Mre11Q61216 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.98■□□□□ 0.31
Mre11Q61216 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.98■□□□□ 0.31
Mre11Q61216 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Mre11Q61216 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.98■□□□□ 0.31
Mre11Q61216 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mre11Q61216 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Mre11Q61216 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Mre11Q61216 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.97■□□□□ 0.31
Mre11Q61216 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC16.97■□□□□ 0.31
Mre11Q61216 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.97■□□□□ 0.31
Mre11Q61216 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.97■□□□□ 0.31
Mre11Q61216 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.97■□□□□ 0.31
Mre11Q61216 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.97■□□□□ 0.31
Mre11Q61216 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mre11Q61216 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Mre11Q61216 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Mre11Q61216 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mre11Q61216 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Mre11Q61216 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Olfr129-201ENSMUST00000122318 993 ntBASIC16.96■□□□□ 0.31
Mre11Q61216 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.96■□□□□ 0.31
Mre11Q61216 Gm21362-201ENSMUST00000194272 928 ntBASIC16.96■□□□□ 0.31
Mre11Q61216 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.96■□□□□ 0.31
Mre11Q61216 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.96■□□□□ 0.31
Mre11Q61216 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Mre11Q61216 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
Mre11Q61216 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mre11Q61216 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mre11Q61216 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mre11Q61216 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mre11Q61216 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Mre11Q61216 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Mre11Q61216 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Mre11Q61216 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mre11Q61216 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms