Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl5Q3UTQ8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cdkl5Q3UTQ8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl5Q3UTQ8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl5Q3UTQ8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdkl5Q3UTQ8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdkl5Q3UTQ8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Gm5779-201ENSMUST00000218467 910 ntBASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdkl5Q3UTQ8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdkl5Q3UTQ8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms