Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm8258-201ENSMUST00000055593 1449 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Cks1bP61025 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Cks1bP61025 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Cks1bP61025 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.13□□□□□ -0.79
Cks1bP61025 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Cks1bP61025 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Mir3081-201ENSMUST00000175305 84 ntBASIC10.13□□□□□ -0.79
Cks1bP61025 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Cks1bP61025 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.13□□□□□ -0.79
Cks1bP61025 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.13□□□□□ -0.79
Cks1bP61025 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.13□□□□□ -0.79
Cks1bP61025 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.13□□□□□ -0.79
Cks1bP61025 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Cks1bP61025 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Cks1bP61025 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.13□□□□□ -0.79
Cks1bP61025 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.13□□□□□ -0.79
Cks1bP61025 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.13□□□□□ -0.79
Cks1bP61025 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Cks1bP61025 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cks1bP61025 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC10.13□□□□□ -0.79
Cks1bP61025 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
Cks1bP61025 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.12□□□□□ -0.79
Cks1bP61025 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Cks1bP61025 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.12□□□□□ -0.79
Cks1bP61025 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.12□□□□□ -0.79
Cks1bP61025 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Gm25745-201ENSMUST00000174945 133 ntBASIC10.12□□□□□ -0.79
Cks1bP61025 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.12□□□□□ -0.79
Cks1bP61025 Gm29518-201ENSMUST00000190858 372 ntBASIC10.12□□□□□ -0.79
Cks1bP61025 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.12□□□□□ -0.79
Cks1bP61025 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Gm18622-201ENSMUST00000219361 595 ntBASIC10.12□□□□□ -0.79
Cks1bP61025 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.12□□□□□ -0.79
Cks1bP61025 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Cks1bP61025 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms