Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cd28P31041 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cd28P31041 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.49□□□□□ -0.41
Cd28P31041 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.49□□□□□ -0.41
Cd28P31041 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Gm11764-201ENSMUST00000120221 623 ntBASIC12.49□□□□□ -0.41
Cd28P31041 Gm15173-201ENSMUST00000122049 433 ntBASIC12.49□□□□□ -0.41
Cd28P31041 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.49□□□□□ -0.41
Cd28P31041 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Cd28P31041 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cd28P31041 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cd28P31041 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cd28P31041 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Cd28P31041 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cd28P31041 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.48□□□□□ -0.41
Cd28P31041 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.48□□□□□ -0.41
Cd28P31041 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cd28P31041 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cd28P31041 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cd28P31041 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Cd28P31041 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Cd28P31041 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd28P31041 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd28P31041 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Cd28P31041 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd28P31041 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cd28P31041 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.47□□□□□ -0.41
Cd28P31041 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.47□□□□□ -0.41
Cd28P31041 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Cd28P31041 Gm9182-201ENSMUST00000217829 639 ntBASIC12.47□□□□□ -0.41
Cd28P31041 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cd28P31041 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms