Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
Hoxc6P10629 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hoxc6P10629 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm13612-201ENSMUST00000119276 390 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm13689-201ENSMUST00000119360 685 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm16342-201ENSMUST00000124025 1025 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.63■□□□□ 0.09
Hoxc6P10629 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.63■□□□□ 0.09
Hoxc6P10629 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hoxc6P10629 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Hoxc6P10629 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Hoxc6P10629 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Gm15198-201ENSMUST00000117283 177 ntBASIC15.62■□□□□ 0.09
Hoxc6P10629 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.62■□□□□ 0.09
Hoxc6P10629 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.62■□□□□ 0.09
Hoxc6P10629 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Hoxc6P10629 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.62■□□□□ 0.09
Hoxc6P10629 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.62■□□□□ 0.09
Hoxc6P10629 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.62■□□□□ 0.09
Hoxc6P10629 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hoxc6P10629 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hoxc6P10629 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.62■□□□□ 0.09
Hoxc6P10629 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hoxc6P10629 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Gm15371-201ENSMUST00000117057 784 ntBASIC15.61■□□□□ 0.09
Hoxc6P10629 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.61■□□□□ 0.09
Hoxc6P10629 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.61■□□□□ 0.09
Hoxc6P10629 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.61■□□□□ 0.09
Hoxc6P10629 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.61■□□□□ 0.09
Hoxc6P10629 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.61■□□□□ 0.09
Hoxc6P10629 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hoxc6P10629 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.61■□□□□ 0.09
Hoxc6P10629 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.61■□□□□ 0.09
Hoxc6P10629 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hoxc6P10629 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms