Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Gm8410-201ENSMUST00000117225 605 ntBASIC12.32□□□□□ -0.44
PtcraP0C6B2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Gm12428-201ENSMUST00000119844 727 ntBASIC12.32□□□□□ -0.44
PtcraP0C6B2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.32□□□□□ -0.44
PtcraP0C6B2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PtcraP0C6B2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Gm25948-201ENSMUST00000175334 112 ntBASIC12.31□□□□□ -0.44
PtcraP0C6B2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Gm27533-201ENSMUST00000183800 152 ntBASIC12.31□□□□□ -0.44
PtcraP0C6B2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
PtcraP0C6B2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.31□□□□□ -0.44
PtcraP0C6B2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PtcraP0C6B2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.3□□□□□ -0.44
PtcraP0C6B2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Gm22175-201ENSMUST00000175007 78 ntBASIC12.3□□□□□ -0.44
PtcraP0C6B2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.3□□□□□ -0.44
PtcraP0C6B2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.3□□□□□ -0.44
PtcraP0C6B2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.3□□□□□ -0.44
PtcraP0C6B2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PtcraP0C6B2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms