Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12-1A0N8R1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Rpph1-201ENSMUST00000175096 319 ntBASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav12-1A0N8R1 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Gm11543-201ENSMUST00000120758 370 ntBASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav12-1A0N8R1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Acot6-202ENSMUST00000222921 3622 ntBASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm6973-201ENSMUST00000117080 721 ntBASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.8□□□□□ -0.52
Trav12-1A0N8R1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms