Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.11□□□□□ -0.15
Tubb3Q9ERD7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Gm14042-201ENSMUST00000120139 833 ntBASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Gm22175-201ENSMUST00000175007 78 ntBASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Gm2451-201ENSMUST00000199447 999 ntBASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Gm10290-201ENSMUST00000200451 999 ntBASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tubb3Q9ERD7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tubb3Q9ERD7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tubb3Q9ERD7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms