Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.91□□□□□ -0.18
Trim16Q99PP9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim16Q99PP9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Gm6973-201ENSMUST00000117080 721 ntBASIC13.9□□□□□ -0.18
Trim16Q99PP9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Mir1895-201ENSMUST00000122615 79 ntBASIC13.9□□□□□ -0.18
Trim16Q99PP9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.9□□□□□ -0.18
Trim16Q99PP9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.9□□□□□ -0.18
Trim16Q99PP9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim16Q99PP9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.89□□□□□ -0.19
Trim16Q99PP9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Gm6736-201ENSMUST00000166583 948 ntBASIC13.89□□□□□ -0.19
Trim16Q99PP9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.89□□□□□ -0.19
Trim16Q99PP9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim16Q99PP9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 Gm8749-201ENSMUST00000117737 331 ntBASIC13.88□□□□□ -0.19
Trim16Q99PP9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trim16Q99PP9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms