Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Clp1Q99LI9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gm12384-201ENSMUST00000119228 919 ntBASIC14.88□□□□□ -0.03
Clp1Q99LI9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gm24644-201ENSMUST00000157114 139 ntBASIC14.88□□□□□ -0.03
Clp1Q99LI9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gm43179-201ENSMUST00000198797 275 ntBASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gm9257-201ENSMUST00000221254 232 ntBASIC14.88□□□□□ -0.03
Clp1Q99LI9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clp1Q99LI9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.87□□□□□ -0.03
Clp1Q99LI9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm5187-201ENSMUST00000117317 991 ntBASIC14.87□□□□□ -0.03
Clp1Q99LI9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm27514-201ENSMUST00000183692 110 ntBASIC14.87□□□□□ -0.03
Clp1Q99LI9 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm38223-201ENSMUST00000194484 695 ntBASIC14.87□□□□□ -0.03
Clp1Q99LI9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.87□□□□□ -0.03
Clp1Q99LI9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.87□□□□□ -0.03
Clp1Q99LI9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clp1Q99LI9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.86□□□□□ -0.03
Clp1Q99LI9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.86□□□□□ -0.03
Clp1Q99LI9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.86□□□□□ -0.03
Clp1Q99LI9 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clp1Q99LI9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms