Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Mir1938-201ENSMUST00000158746 100 ntBASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Gm27838-201ENSMUST00000184829 128 ntBASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Gm44855-201ENSMUST00000205725 362 ntBASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Gm18062-201ENSMUST00000208020 547 ntBASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Gm18055-201ENSMUST00000208254 547 ntBASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ddx1Q91VR5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Gm14719-201ENSMUST00000121891 340 ntBASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.66□□□□□ -0.06
Ddx1Q91VR5 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ddx1Q91VR5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.65□□□□□ -0.06
Ddx1Q91VR5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Gm29541-201ENSMUST00000191351 678 ntBASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Syt7-204ENSMUST00000223586 1344 ntBASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ddx1Q91VR5 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx1Q91VR5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx1Q91VR5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx1Q91VR5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx1Q91VR5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ddx1Q91VR5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ddx1Q91VR5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms