Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Gm17971-201ENSMUST00000190239 806 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Gm10154-201ENSMUST00000084445 354 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Acot6-202ENSMUST00000222921 3622 ntBASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lysmd4Q8CC84 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm10060-201ENSMUST00000212002 111 ntBASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lysmd4Q8CC84 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Gm25925-201ENSMUST00000158314 306 ntBASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lysmd4Q8CC84 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lysmd4Q8CC84 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms