Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gm22323-201ENSMUST00000103832 109 ntBASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gm13886-201ENSMUST00000117876 1183 ntBASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gm42550-201ENSMUST00000201553 960 ntBASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col16a1Q8BLX7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Gm17330-201ENSMUST00000221047 165 ntBASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col16a1Q8BLX7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Mir686-201ENSMUST00000102174 109 ntBASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Gm7895-201ENSMUST00000187459 1173 ntBASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col16a1Q8BLX7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Col16a1Q8BLX7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col16a1Q8BLX7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.27■□□□□ 0.51
Col16a1Q8BLX7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col16a1Q8BLX7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col16a1Q8BLX7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col16a1Q8BLX7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Col16a1Q8BLX7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Gm6203-201ENSMUST00000209575 1342 ntBASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Col16a1Q8BLX7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Itm2b-204ENSMUST00000228637 783 ntBASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC18.25■□□□□ 0.51
Col16a1Q8BLX7 Gm10040-201ENSMUST00000080726 1662 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms