Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.05□□□□□ -0.16
Scn2bQ56A07 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm10275-201ENSMUST00000092620 635 ntBASIC14.05□□□□□ -0.16
Scn2bQ56A07 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.05□□□□□ -0.16
Scn2bQ56A07 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Gm4995-201ENSMUST00000117247 432 ntBASIC14.04□□□□□ -0.16
Scn2bQ56A07 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.04□□□□□ -0.16
Scn2bQ56A07 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.04□□□□□ -0.16
Scn2bQ56A07 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scn2bQ56A07 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.03□□□□□ -0.16
Scn2bQ56A07 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Scn2bQ56A07 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.02□□□□□ -0.16
Scn2bQ56A07 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn2bQ56A07 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Gm11025-201ENSMUST00000140773 466 ntBASIC14.02□□□□□ -0.17
Scn2bQ56A07 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn2bQ56A07 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Scn2bQ56A07 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn2bQ56A07 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn2bQ56A07 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms