Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.99□□□□□ -0.65
Cdx4Q07424 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdx4Q07424 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.99□□□□□ -0.65
Cdx4Q07424 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.99□□□□□ -0.65
Cdx4Q07424 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.99□□□□□ -0.65
Cdx4Q07424 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Cdx4Q07424 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.99□□□□□ -0.65
Cdx4Q07424 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdx4Q07424 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdx4Q07424 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdx4Q07424 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Mir449b-201ENSMUST00000104833 80 ntBASIC10.98□□□□□ -0.65
Cdx4Q07424 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.98□□□□□ -0.65
Cdx4Q07424 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 AA543401-201ENSMUST00000164248 1269 ntBASIC10.98□□□□□ -0.65
Cdx4Q07424 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Gm25948-201ENSMUST00000175334 112 ntBASIC10.98□□□□□ -0.65
Cdx4Q07424 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.98□□□□□ -0.65
Cdx4Q07424 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.98□□□□□ -0.65
Cdx4Q07424 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cdx4Q07424 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cdx4Q07424 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdx4Q07424 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Gm6973-201ENSMUST00000117080 721 ntBASIC10.97□□□□□ -0.65
Cdx4Q07424 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.97□□□□□ -0.65
Cdx4Q07424 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.97□□□□□ -0.65
Cdx4Q07424 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.97□□□□□ -0.65
Cdx4Q07424 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cdx4Q07424 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms