Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.65□□□□□ -0.38
H3f3aP84244 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3aP84244 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
H3f3aP84244 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
H3f3aP84244 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
H3f3aP84244 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.64□□□□□ -0.39
H3f3aP84244 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.64□□□□□ -0.39
H3f3aP84244 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
H3f3aP84244 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
H3f3aP84244 Gm15653-201ENSMUST00000119247 907 ntBASIC12.64□□□□□ -0.39
H3f3aP84244 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.64□□□□□ -0.39
H3f3aP84244 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.64□□□□□ -0.39
H3f3aP84244 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.64□□□□□ -0.39
H3f3aP84244 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Gm44872-201ENSMUST00000207864 420 ntBASIC12.64□□□□□ -0.39
H3f3aP84244 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
H3f3aP84244 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
H3f3aP84244 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
H3f3aP84244 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.64□□□□□ -0.39
H3f3aP84244 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3aP84244 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.64□□□□□ -0.39
H3f3aP84244 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
H3f3aP84244 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
H3f3aP84244 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
H3f3aP84244 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.63□□□□□ -0.39
H3f3aP84244 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
H3f3aP84244 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
H3f3aP84244 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
H3f3aP84244 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Mir6956-201ENSMUST00000183598 62 ntBASIC12.63□□□□□ -0.39
H3f3aP84244 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
H3f3aP84244 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3aP84244 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
H3f3aP84244 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.62□□□□□ -0.39
H3f3aP84244 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.62□□□□□ -0.39
H3f3aP84244 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
H3f3aP84244 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3aP84244 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.62□□□□□ -0.39
H3f3aP84244 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H3f3aP84244 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.62□□□□□ -0.39
H3f3aP84244 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
H3f3aP84244 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
H3f3aP84244 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.62□□□□□ -0.39
H3f3aP84244 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms