Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcaP82350 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcaP82350 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcaP82350 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcaP82350 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcaP82350 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SgcaP82350 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SgcaP82350 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SgcaP82350 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SgcaP82350 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.9□□□□□ -0.5
SgcaP82350 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.9□□□□□ -0.5
SgcaP82350 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SgcaP82350 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
SgcaP82350 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.9□□□□□ -0.5
SgcaP82350 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.9□□□□□ -0.5
SgcaP82350 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SgcaP82350 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SgcaP82350 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.9□□□□□ -0.5
SgcaP82350 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SgcaP82350 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SgcaP82350 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
SgcaP82350 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SgcaP82350 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SgcaP82350 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
SgcaP82350 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.9□□□□□ -0.51
SgcaP82350 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SgcaP82350 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
SgcaP82350 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.89□□□□□ -0.51
SgcaP82350 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.89□□□□□ -0.51
SgcaP82350 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SgcaP82350 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SgcaP82350 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.89□□□□□ -0.51
SgcaP82350 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.89□□□□□ -0.51
SgcaP82350 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SgcaP82350 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.89□□□□□ -0.51
SgcaP82350 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SgcaP82350 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SgcaP82350 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SgcaP82350 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SgcaP82350 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
SgcaP82350 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.88□□□□□ -0.51
SgcaP82350 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SgcaP82350 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms