Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Nphp4P59240 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nphp4P59240 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nphp4P59240 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nphp4P59240 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC19.02■□□□□ 0.64
Nphp4P59240 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Gm13226-201ENSMUST00000117838 404 ntBASIC19.02■□□□□ 0.64
Nphp4P59240 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.02■□□□□ 0.64
Nphp4P59240 AY702102-202ENSMUST00000194651 1173 ntBASIC19.02■□□□□ 0.64
Nphp4P59240 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.02■□□□□ 0.64
Nphp4P59240 Gm17870-201ENSMUST00000219489 1174 ntBASIC19.02■□□□□ 0.64
Nphp4P59240 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.02■□□□□ 0.64
Nphp4P59240 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nphp4P59240 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Nphp4P59240 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Nphp4P59240 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nphp4P59240 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nphp4P59240 Gm8337-201ENSMUST00000187358 1938 ntBASIC19.02■□□□□ 0.63
Nphp4P59240 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nphp4P59240 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nphp4P59240 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nphp4P59240 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Gm11425-201ENSMUST00000119608 498 ntBASIC19.01■□□□□ 0.63
Nphp4P59240 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
Nphp4P59240 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC19.01■□□□□ 0.63
Nphp4P59240 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC19.01■□□□□ 0.63
Nphp4P59240 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC19.01■□□□□ 0.63
Nphp4P59240 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC19.01■□□□□ 0.63
Nphp4P59240 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nphp4P59240 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC19.01■□□□□ 0.63
Nphp4P59240 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Gm9396-201ENSMUST00000076703 567 ntBASIC19.01■□□□□ 0.63
Nphp4P59240 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.01■□□□□ 0.63
Nphp4P59240 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nphp4P59240 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Nphp4P59240 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nphp4P59240 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Gm15770-201ENSMUST00000117498 584 ntBASIC19■□□□□ 0.63
Nphp4P59240 Gm11803-201ENSMUST00000119966 444 ntBASIC19■□□□□ 0.63
Nphp4P59240 Gm17330-201ENSMUST00000221047 165 ntBASIC19■□□□□ 0.63
Nphp4P59240 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Nphp4P59240 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19■□□□□ 0.63
Nphp4P59240 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC19■□□□□ 0.63
Nphp4P59240 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Nphp4P59240 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nphp4P59240 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19■□□□□ 0.63
Nphp4P59240 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC19■□□□□ 0.63
Nphp4P59240 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Gm27486-201ENSMUST00000184923 80 ntBASIC19■□□□□ 0.63
Nphp4P59240 Gm29127-201ENSMUST00000188304 517 ntBASIC19■□□□□ 0.63
Nphp4P59240 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nphp4P59240 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC19■□□□□ 0.63
Nphp4P59240 Gm13730-201ENSMUST00000121036 1462 ntBASIC19■□□□□ 0.63
Nphp4P59240 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nphp4P59240 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nphp4P59240 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Nphp4P59240 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.99■□□□□ 0.63
Nphp4P59240 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Nphp4P59240 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nphp4P59240 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
Nphp4P59240 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms